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Bootcamp is led by current BISB/BMI PhD students with help from many others!

Table of contents

  1. Bootcamp Instructors
  2. Program Chairs and Administration
  3. Guest Instructors
  4. Fellowships Panelists
  5. Questions?
  6. Credits

Bootcamp Instructors

Bootcamp instructors curate Bootcamp’s content and teach the majority of modules.

Avery Pong he/him

Email: avpong at ucsd.edu

4th year BISB PhD student

Advisor: Gene Yeo

Cemil Can Ali Marandi ("JJ") he/him

Email: calimarandi at ucsd.edu

4th year BISB PhD student

Advisor: Ferhat Ay

Molly Sacks she/her

Email: msacks at ucsd.edu

4th year BISB PhD student

Advisor: Jonathan Sebat

Zane Koch he/him

Email: zkoch at ucsd.edu

5th BISB PhD student

Advisor: Trey Ideker

Program Chairs and Administration

Program chairs and administrators present information about program operations.

Amy Sitapati, PhD

Email: asitapati at ucsd.edu

Clinical Professor, Medicine

DBMI Director

Terry Gaasterland, PhD

Email: tgaasterland at ucsd.edu

Professor of Computational Biology and Genomics, Scripps Institution of Oceanography (SIO)

BISB Graduate Program Chair

Guest Instructors

Guest instructors lead modules on specialized topics.

Daniel Halmos he/him

Email: dhalmos at ucsd.edu

3rd year BISB PhD student

Advisor: Trey Ideker

Sessions:

  • UAW Union Presentation
  • Jade Wang she/her

    Email: jaw047 at ucsd.edu

    2nd year BISB PhD student

    Advisor: Joel Wertheim

    Sessions:

  • Module 9: Reproducible Bioinformatics
  • Jonathan Kirkland he/him

    Email: jokirkland at ucsd.edu

    3rd year BISB PhD student

    Advisor: Rob Knight

    Sessions:

  • Module 9: Reproducible Bioinformatics
  • GBIC Reps
  • Karen Pu she/her

    Email: kcpu at ucsd.edu

    2nd year BISB PhD student

    Advisor: Gene Yeo

    Sessions:

  • Breakout: Choosing a PhD Advisor
  • Keegan Flanagan he/him

    Email: keflanagan at ucsd.edu

    3rd year BISB PhD student

    Advisor: Gene Yeo

    Sessions:

  • Breakout: International Student Panel
  • Kiki Spaulding she/her

    Email: kspaulding at ucsd.edu

    5th year BISB PhD student

    Advisor: Louise Laurent

    Sessions:

  • Breakout: Choosing a PhD Advisor
  • Scarlett Qian she/her

    Email: geqian at ucsd.edu

    5th year BISB PhD student

    Advisor: Trey Ideker

    Sessions:

  • Breakout: International Student Panel
  • Fellowships Panelists

    These students will sit on a panel for Q&A during the Fellowships session

    Denghui Chen he/him

    Email: dec037 at health.ucsd.edu

    4th year BISB PhD student

    Advisor: Abraham Palmer

    Hyrum Eddington he/him

    Email: heddington at ucsd.edu

    3rd year BISB PhD student

    Advisor: Kit Curtius

    Questions?

    For questions about bootcamp, please contact the bootcamp instructors!

    For questions about student life feel free to message to the BISB Student Discord. You should have received an invite link via email. Our discord server is entirely student-run, and you can find people from different labs, years, and program tracks. It is a great informal resource to chat with fellow students.

    Since the BISB Student Discord is completely student-run, we ask that you do not share the invite link with faculty or staff members.

    For questions about specifics of the program and program requirements, please contact the Student Affairs Manager Vanessa Hollingsworth (bisbsupport@ucsd.edu and cc vkhollin@ucsd.edu).

    Credits

    Bootcamp content is either newly generated or adapted from previous years’ work. We would like to credit past bootcamp instructors for their contributions, much of which the current content is based on.

    • Mike Cuoco, 2021-2022
    • Michelle Ragsac, 2020-2021
    • Cameron Martino, 2020-2021
    • Owen Chapman, 2019-2020
    • Jessica Zhou, 2018-2019

    Past bootcamp instructors from 2023 & 2024 also contributed to the foundation of this content.