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Schedule Details

Bootcamp is held in the week prior to the start of Fall classes, from September 15, 2025 to September 19, 2025. Lunch will be provided each day.

Please note the schedule is actively being developed and is subject to change.

Color Key

Module
Program Information
Social Event
Break
Other

Monday, September 15, 2025

Opening Remarks

9:30 AM-10:30 AM
Location: MET 204
Terry Gaasterland, BISB Program Chair

Welcome to the BISB/BMI graduate program! Our program directors will provide an overview of the Bioinformatics and Systems Biology graduate program.

BISB Administrative Overview

10:45 AM-12:00 PM
Location: MET 204
Terry Gaasterland, BISB Program Chair

Lunch

12:00 PM-1:00 PM

UAW Union Presentation

1:00 PM-1:30 PM
Location: MET 204

Ice-breakers

1:30 PM-2:30 PM
Location: MET 204

Guest Speakers: How to choose an advisor/international student breakouts

2:30 PM-3:30 PM
Location: MET 204

Module 2: Course Recommendation

3:30 PM-4:00 PM
Location: MET 204

Tuesday, September 16, 2025

DBMI Intro

9:30 AM-9:45 AM
Location: MET 223
Amy Sitapati, DBMI Director

For our BMI students, welcome! Dr. Amy Sitapti will introduce the Department of Biomedical Informatics (DBMI) at UCSD. Researchers from BISB and BMI often get to work together so this a great opportunity for both BISB and BMI students to learn more about the DBMI.

Module 3: Introduction to Stats

9:45 AM-10:30 AM
Location: MET 223

Module 4: Introduction to Machine Learning

10:30 AM-11:30 AM
Location: MET 223

Lunch

11:30 AM-1:00 PM

Wednesday, September 17, 2025

PhD-Level Scientific Communication

9:30 AM-10:30 AM
Location: MET 141

Module 7A: Your Virtual Environment

10:45 AM-12:00 PM
Location: MET 141

Lunch

12:00 PM-1:00 PM

Module 7B: Software - Part 2

1:00 PM-2:00 PM
Location: MET 141

Getting Paid: Predoctoral Fellowships

2:00 PM-3:00 PM
Location: MET 141

Thursday, September 18, 2025

Module 5: Bioinformatics Problem Sets

9:30 AM-10:30 AM
Location: MET 141

In this module, you and a partner will be given a relatively simple problem to solve from the Rosalind Bioinformatics Project’s textbook track and bioinformatics stronghold track. By the end of this module, you should: 1. Have a working solution for your problem prepared! 2. Have a short slide (in this presentation) explaining your code along with a fun fact about yourselves!

Mental Health in Graduate School

10:30 AM-11:00 AM
Location: MET 141

Module 6: Data Science (AI & Plotting)

11:00 AM-12:00 PM
Location: MET 141

Lunch

12:00 PM-1:00 PM

Module 8: Intro to NGS and Benchwork

1:00 PM-2:00 PM
Location: MET 141

The BISB Guide to San Diego

2:00 PM-3:00 PM
Location: MET 141

Friday, September 19, 2025

Module 9: Reproducible Bioinformatics

10:00 AM-11:00 AM
Location: MET 204

Module 10: Formulating a Scientific Question

11:00 AM-12:00 PM
Location: MET 204

GBIC Reps

12:00 PM-12:30 PM
Location: MET 204

Lunch + Exit Survey + Picture

12:30 PM-1:45 PM