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Schedule Details

Bootcamp is held in the week prior to the start of Fall classes, from September 14, 2026 to September 18, 2026. Lunch will be provided each day.

Please note the schedule is actively being developed and is subject to change.

Color Key

Module
Program Information
Social Event
Break
Other

Monday, September 14, 2026

Opening Remarks

9:30 AM-10:30 AM
Terry Gaasterland, BISB Program Chair

Welcome to the BISB/BMI graduate program! Our program directors will provide an overview of the Bioinformatics and Systems Biology graduate program.

BISB Administrative Overview

10:30 AM-11:30 AM
Glenn + Amber

UAW Union Presentation

11:30 AM-12:00 PM

Lunch

12:00 PM-1:00 PM

Choose an Advisor/Rotations

2:00 PM-2:30 PM

How to Get Paid?

2:30 PM-3:00 PM

Course Recommendations

3:00 PM-3:30 PM

International Student breakout

3:30 PM-4:30 PM

Tuesday, September 15, 2026

DBMI Introduction

9:30 AM-10:00 AM
Amy Sitapati, DBMI Director

For our BMI students, welcome! Dr. Amy Sitapati will introduce the Department of Biomedical Informatics (DBMI) at UCSD. Researchers from BISB and BMI often get to work together so this is a great opportunity for both BISB and BMI students to learn more about the DBMI.

Module 1: Introduction to Statistics

10:00 AM-11:00 AM

Module 2: Introduction to Machine Learning

11:00 AM-12:00 PM

Lunch

12:00 PM-1:00 PM

Predoctoral Fellowships

1:00 PM-2:00 PM

Module 3: Paired Programing

2:00 PM-3:30 PM

Wednesday, September 16, 2026

Mental Health

9:30 AM-10:00 AM

Module 4: Virtual Environments

10:00 AM-11:00 AM

Module 5: Software on a team

11:00 AM-12:00 PM

Lunch

12:00 PM-1:00 PM

Break for walk

1:00 PM-1:30 PM

Thursday, September 17, 2026

Formulating a Scientific Question

9:30 AM-10:00 AM

Module 6: Data Science (plotting/pandas)

10:00 AM-11:00 AM

Module 7: Data Science (AI/agents)

11:00 AM-12:00 PM

Lunch

12:00 PM-1:00 PM

Module 8: PhD Level Scientific Communication

1:00 PM-2:00 PM

Module 9: Introduction to NGS/Benchwork

2:00 PM-3:00 PM

BISB community - Wellness/Diversity

3:00 PM-3:30 PM

Module 10: nextflow + snakemake?

3:30 PM-4:30 PM

Friday, September 18, 2026

Module 11: Reproducible Bioinformatics

10:00 AM-11:00 AM

GBIC Reps

11:00 AM-11:30 AM

Exit Survey

11:30 AM-12:00 PM

Lunch

12:00 PM-1:00 PM

Break for people to walk back/drive - Avery will coordinate with Sanford staff

1:00 PM-2:30 PM