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Schedule Details

Bootcamp is held in the week prior to the start of Fall classes, from September 14, 2026 to September 18, 2026. Lunch will be provided each day.

Please note the schedule is actively being developed and is subject to change.

Color Key

Module
Program Information
Social Event
Break
Other

Monday, September 14, 2026

Opening Remarks

9:30 AM-10:30 AM
Location: RM 145
Terry Gaasterland, BISB Program Chair

Welcome to the BISB/BMI graduate program! Our program directors will provide an overview of the Bioinformatics and Systems Biology graduate program.

BISB Administrative Overview

10:30 AM-11:30 AM
Location: RM 145
Glenn + Amber

UAW Union Presentation

11:30 AM-12:00 PM
Location: RM 145

Lunch

12:00 PM-1:00 PM

Choose an Advisor/Rotations

2:00 PM-2:30 PM
Location: RM 145

How to Get Paid?

2:30 PM-3:00 PM
Location: RM 145

Course Recommendations

3:00 PM-3:30 PM
Location: RM 145

International Student breakout

3:30 PM-4:30 PM
Location: RM 145

Tuesday, September 15, 2026

DBMI Introduction

9:30 AM-10:00 AM
Location: RM 145
Amy Sitapati, DBMI Director

For our BMI students, welcome! Dr. Amy Sitapati will introduce the Department of Biomedical Informatics (DBMI) at UCSD. Researchers from BISB and BMI often get to work together so this is a great opportunity for both BISB and BMI students to learn more about the DBMI.

Module 1: Introduction to Statistics

10:00 AM-11:00 AM
Location: RM 145

Module 2: Introduction to Machine Learning

11:00 AM-12:00 PM
Location: RM 145

Lunch

12:00 PM-1:00 PM

Predoctoral Fellowships

1:00 PM-2:00 PM
Location: RM 145

Module 3: Paired Programing

2:00 PM-3:30 PM
Location: RM 145

Wednesday, September 16, 2026

Mental Health

9:30 AM-10:00 AM
Location: RM 145

Module 4: Virtual Environments

10:00 AM-11:00 AM
Location: RM 145

Module 5: Software on a team

11:00 AM-12:00 PM
Location: RM 145

Lunch

12:00 PM-1:00 PM

Break for walk

1:00 PM-1:30 PM

Thursday, September 17, 2026

Formulating a Scientific Question

9:30 AM-10:00 AM
Location: RM 145

Module 6: Data Science (plotting/pandas)

10:00 AM-11:00 AM
Location: RM 145

Module 7: Data Science (AI/agents)

11:00 AM-12:00 PM
Location: RM 145

Lunch

12:00 PM-1:00 PM

Module 8: PhD Level Scientific Communication

1:00 PM-2:00 PM
Location: RM 145

Module 9: Introduction to NGS/Benchwork

2:00 PM-3:00 PM
Location: RM 145

BISB community - Wellness/Diversity

3:00 PM-3:30 PM
Location: RM 145

Module 10: nextflow + snakemake?

3:30 PM-4:30 PM
Location: RM 145

Friday, September 18, 2026

Module 11: Reproducible Bioinformatics

10:00 AM-11:00 AM
Location: MET Upper Auditorium

GBIC Reps

11:00 AM-11:30 AM
Location: MET Upper Auditorium

Exit Survey

11:30 AM-12:00 PM
Location: MET Upper Auditorium

Lunch

12:00 PM-1:00 PM

Break for people to walk back/drive - Avery will coordinate with Sanford staff

1:00 PM-2:30 PM